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Schema
Citing CMDGA
Clear Filters
Annotation type
9
binding sites
8
accessible chromatin
5
histone modifications
4
gene expression
3
target gene predictions
2
candidate regulatory elements
2
chromatin state
Annotation Category
8
cis-regulatory elements
Annotation type Category
5
ATAC-seq
2
snATAC-seq
1
DNase-seq
Available data
8
bed bed3+
3
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
cell line
Biosample term
8
hepatocyte
6
endothelial cell of hepatic sinusoid
4
liver
3
hepatic stellate cell
3
stomach
2
HepG2
1
HuH-7
1
foveolar cell of stomach
1
gastric goblet cell
1
parietal cell
1
peptic cell
1
stomach neuroendocrine cell
Organ
8
liver
6
blood vessel
6
epithelium
6
vasculature
0
stomach
Life stage
5
adult
2
fetal
Date released
4
February, 2024
2
November, 2021
1
February, 2021
1
June, 2020
Software used
8
macs
Lab
4
Ines Cebola, Imperial College London
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
6
AMP
2
ENCODE
RFA
4
AMP2
2
AMP
2
ENCODE3
Showing 8 of 8 results
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Download
FileSet
DSR947VGN
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR698JKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR573JPW
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR467GJM
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR269PNK
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR195UVD
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR848MAN
released
Annotation file set
: Accessible chromatin of E-MTAB-7543 - ATAC-seq of HepG2 cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR505YPM
released
Annotation file set
: Accessible chromatin annotation for Liver Hep G2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP