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Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
3
binding sites
3
chromatin state
3
target gene predictions
2
accessible chromatin
2
eQTL
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
1
RNA-seq
Available data
3
bed bed9
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
testis
Organ
275
epithelium
272
kidney
87
brain
83
musculature of body
80
connective tissue
71
heart
66
lung
61
intestine
60
pancreas
60
vasculature
55
limb
49
blood vessel
37
large intestine
37
liver
30
embryo
30
extraembryonic component
30
skin of body
26
stomach
25
bodily fluid
23
adipose tissue
23
blood
20
small intestine
16
bone element
15
adrenal gland
15
placenta
14
artery
13
mammary gland
13
ureter
11
thymus
10
penis
10
prostate gland
9
gonad
8
esophagus
8
spinal cord
7
eye
7
spleen
6
nerve
6
uterus
6
vein
5
lymph node
5
lymphoid tissue
5
ovary
5
thyroid gland
4
mouth
4
testis
3
breast
3
lymphatic vessel
3
skeleton
3
tongue
3
urinary bladder
3
vagina
1
bone marrow
1
nose
1
pericardium
1
pituitary gland
Life stage
3
adult
1
embryonic
unknown
Date released
3
September, 2022
1
March, 2024
Software used
3
chromhmm
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
unknown
Showing 4 of 4 results
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Download
FileSet
DSR562FVN
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Testis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR845ZVQ
released
Annotation file set
: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR211VUO
released
Annotation file set
: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666MOR
released
Annotation file set
: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP