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Schema
Citing CMDGA
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Annotation type
18
accessible chromatin
10
gene expression
8
target gene predictions
4
binding sites
3
variant allelic effects
2
caQTL
2
candidate regulatory elements
2
histone modifications
1
chromatin state
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
6
endothelial cell of hepatic sinusoid
4
keratinocyte
4
mammary epithelial cell
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
endothelial cell
2
endothelial cell of umbilical vein
2
mammary gland epithelial cell
2
pancreatic ductal cell
2
retinal pigment epithelial cell
2
tracheal epithelial cell
1
aortic endothelial cell
1
dermis lymphatic vessel endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
foreskin keratinocyte
1
hepatocyte
1
kidney epithelium
1
meso-epithelial cell
1
pulmonary artery endothelial cell
1
renal connecting tubule
1
vein endothelial cell
Organ
4
epithelium
2
brain
2
vasculature
0
thyroid gland
Date released
3
February, 2021
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR600YPJ
released
Annotation file set
: Binding sites annotation for choroid plexus epithelial cell (HCPEpiC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LCX
released
Annotation file set
: Binding sites annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR406JQN
released
Annotation file set
: Binding sites annotation for Cardiovascular Primary_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR388QAH
released
Annotation file set
: Binding sites annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP