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Schema
Citing CMDGA
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Annotation type
5
gene expression
3
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
29
kidney
20
renal cortex interstitium
20
right kidney
18
left kidney
6
left renal cortex interstitium
5
right renal cortex interstitium
4
tongue
3
HEK293
3
kidney tubule cell
2
ACHN
2
Caki2
2
G401
2
RCC 7860
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
renal cortical epithelial cell
1
HEK293T
1
RCC
1
kidney capillary endothelial cell
1
renal cell carcinoma
Organ
2
epithelium
2
kidney
0
tongue
Life stage
1
child
1
young adult
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
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Download
FileSet
DSR003INP
released
Annotation file set
: Candidate regulatory elements for BSS00389 glomerular visceral epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR236ODB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular visceral epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP