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Schema
Citing CMDGA
Clear Filters
Annotation type
6
eQTL
5
gene expression
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
differential activity
1
variant allelic effects
Annotation Category
6
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
6
RNA-seq
1
ChIP-seq
1
RNA microarray
Available data
2
bed bed3+
1
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
2
GRCh38
1
hg18
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
10
adipose tissue
7
subcutaneous adipose tissue
4
omental fat pad
1
subcutaneous abdominal adipose tissue
1
visceral abdominal adipose tissue
Organ
7
adipose tissue
7
connective tissue
0
trachea
Life stage
5
adult
Date released
3
August, 2021
1
August, 2017
1
February, 2020
1
February, 2021
1
January, 2022
Software used
1
chromhmm
1
epacts
1
fast-lmm
1
fastqtl
1
gtex_eqtl:V8
1
mach2qtl
1
matrix-eQTL
1
qTLtools
Lab
5
AMP-T2D consortium
1
Karen Mohlke, UNC
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR655IYK
released
Annotation file set
: eQTL of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP