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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
2
eQTL
2
target gene predictions
2
variant allelic effects
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
1
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
18
brain
5
endothelial cell of umbilical vein
5
temporal lobe
4
angular gyrus
4
aorta
4
caudate nucleus
4
layer of hippocampus
3
ascending aorta
3
cingulate gyrus
3
coronary artery
3
substantia nigra
3
thoracic aorta
3
tibial artery
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
dermis blood vessel endothelial cell
2
frontal cortex
1
A172
1
Ammon's horn
1
BE(2)-C
1
Daoy
1
H54
1
M059J
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
globus pallidus
1
inferior parietal cortex
1
kidney capillary endothelial cell
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
pons
1
pulmonary artery endothelial cell
1
putamen
Organ
3
artery
3
blood vessel
3
limb
3
vasculature
0
brain
0
trachea
Life stage
3
adult
Date released
2
September, 2022
1
May, 2020
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR520FED
released
Annotation file set
: Chromatin states for BSS01838 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ACD
released
Annotation file set
: Chromatin states for BSS01837 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157HZX
released
Annotation file set
: ChromHMM 18-state model for tibial artery from 26 ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP