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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
45
islet of Langerhans
31
renal pelvis
25
pancreatic ductal cell
21
EndoC_BH1
20
body of pancreas
20
pancreas
18
pancreatic acinar cell
18
pancreatic beta cell
17
pancreatic alpha cell
16
pancreatic delta cell
11
endocrine pancreas
10
left renal pelvis
10
pancreatic stellate cell
10
right renal pelvis
6
pancreatic polypeptide-secreting cell
4
Panc1
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
type B pancreatic cell
3
pancreatic quiescent stellate cell
2
8988T
2
HPDE6-E6E7
2
pancreatic endocrine cell
1
activated pancreatic stellate cell
1
pancreatic D cell
1
pancreatic PP cell
1
quiescent pancreatic stellate cell
Disease term
2
pancreatic ductal adenocarcinoma
Organ
4
pancreas
0
ureter
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
files.file_type!
bed bed9
Showing 4 of 4 results
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Download
FileSet
DSR623CCG
released
Annotation file set
: Candidate regulatory elements for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898MBY
released
Annotation file set
: Target gene predictions for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014CHT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Panc1
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988OGT
released
Annotation file set
: enhancer-gene predicton of Panc1-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP