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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
RNA-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
22
foreskin keratinocyte
21
keratinocyte
19
foreskin fibroblast
12
fibroblast of dermis
12
skin fibroblast
10
dermis blood vessel endothelial cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
8
urinary bladder
7
GM23248
6
iPS DF 4.7 Cell Line
5
RPMI7951
5
SK-MEL-5
5
iPS DF 19.11
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
COLO829
3
epidermal melanocyte
3
skin of body
3
suprapubic skin
2
basal cell of epidermis
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
bladder (urinary bladder)
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
Organ
3
skin of body
0
urinary bladder
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
RNA-seq
Showing 3 of 3 results
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Download
FileSet
DSR769MUZ
released
Annotation file set
: Candidate regulatory elements for BSS01587 skin of body from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR028IQA
released
Annotation file set
: Target gene predictions for BSS01587 skin of body from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283COC
released
Annotation file set
: Chromatin states for BSS01587 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP