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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
7
target gene predictions
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
3
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
4
cell line
2
tissue
1
primary cell
Biosample term
4
HeLa-S3
2
uterus
1
uterine smooth muscle cell
Disease term
3
cervical adenocarcinoma
Organ
122
epithelium
80
musculature of body
78
connective tissue
78
lung
76
brain
75
kidney
71
intestine
49
heart
49
limb
44
pancreas
44
skin of body
42
large intestine
36
extraembryonic component
33
embryo
31
vasculature
30
stomach
29
bodily fluid
27
blood
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
7
uterus
6
thyroid gland
5
lymphoid tissue
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
tongue
2
vagina
1
nose
Life stage
4
adult
Date released
February, 2024
4
September, 2022
2
May, 2021
1
November, 2021
Software used
4
r
3
abc
Lab
4
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
1
Bing Ren, UCSD
Project
6
AMP
1
ENCODE
RFA
6
AMP
1
ENCODE3
month_released!
February, 2024
organ_slims!
tongue
Showing 7 of 7 results
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Download
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR691KIE
released
Annotation file set
: Target gene predictions for BSS00541 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR653CGH
released
Annotation file set
: Target gene predictions for BSS00531 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR478MAJ
released
Annotation file set
: Target gene predictions for BSS00529 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838KCD
released
Annotation file set
: Target gene predictions of Smooth Muscle (Uterine) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR363VEB
released
Annotation file set
: enhancer-gene predicton of HeLa-S3-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP