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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
2
RNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
1
tsv
File set status
6
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
59
HeLa-S3
6
uterus
3
Ishikawa
2
endometrium cancer
2
uterine smooth muscle cell
1
cervix - ectocervix
1
endometrium
Organ
6
uterus
Life stage
3
adult
Date released
2
September, 2022
1
January, 2022
1
June, 2020
1
March, 2024
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
1
macs
1
qTLtools
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
annotation_type!
candidate regulatory elements
Showing 6 of 6 results
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Download
FileSet
DSR606YST
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Uterus.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR590GOS
released
Annotation file set
: Chromatin states for BSS01884 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572QKZ
released
Annotation file set
: uterus eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP