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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
2
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
4
DNase-seq
3
ChIP-seq
2
RNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
1
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
62
HeLa-S3
7
uterus
2
uterine smooth muscle cell
1
Ishikawa
1
cervix - ectocervix
Organ
7
uterus
Life stage
4
adult
Date released
3
September, 2022
February, 2021
1
January, 2022
1
June, 2020
1
March, 2024
1
May, 2021
Software used
3
r
1
abc
1
chromhmm
1
macs
1
qTLtools
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
month_released!
February, 2021
organ_slims!
intestine
Showing 7 of 7 results
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Download
FileSet
DSR606YST
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Uterus.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR903VBR
released
Annotation file set
: Candidate regulatory elements for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR590GOS
released
Annotation file set
: Chromatin states for BSS01884 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572QKZ
released
Annotation file set
: uterus eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP