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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
gene expression
2
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
4
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
5
skeletal muscle fiber
5
skeletal muscle satellite cell
3
type I muscle cell
3
type II muscle cell
2
muscle of leg
1
hindlimb muscle
1
Ishikawa
1
LHCN-M2
1
SJCRH30
1
esophagus muscularis mucosa
1
forelimb muscle
1
gastrocnemius medialis
1
muscle of arm
1
psoas muscle
1
skeletal muscle cell
1
uterine smooth muscle cell
1
uterus
Organ
5
musculature of body
0
uterus
Life stage
1
unknown
Date released
3
November, 2021
1
February, 2024
1
May, 2022
Software used
5
macs
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
1
AMP
1
AMP2
organ_slims!
stomach
Showing 5 of 5 results
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Download
FileSet
DSR534XMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of skeletal muscle satellite cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR116URN
released
Annotation file set
: Accessible chromatin annotation of Satellite Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347TWG
released
Annotation file set
: Accessible chromatin annotation of Fetal Satellite Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR101HMU
released
Annotation file set
: Accessible chromatin annotation of Fetal Satellite Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR724QWN
released
Annotation file set
: Cell type chromatin broad peaks and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP