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Schema
Citing CMDGA
Clear Filters
Annotation type
19
gene expression
17
accessible chromatin
7
binding sites
5
histone modifications
4
target gene predictions
4
variant allelic effects
3
differential activity
2
candidate regulatory elements
2
chromatin state
Annotation Category
4
Genetic variant effects
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
Organ
39
epithelium
11
connective tissue
9
vasculature
7
brain
7
pancreas
6
kidney
4
liver
3
blood vessel
3
intestine
3
musculature of body
2
esophagus
2
stomach
1
adrenal gland
1
bronchus
1
eye
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
0
vagina
Life stage
1
adult
1
fetal
Date released
3
May, 2020
1
February, 2024
Software used
4
deltasvm
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR134FAU
released
Annotation file set
: Variant allelic effects of hepatic stellate cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP