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Citing CMDGA
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Annotation type
50
candidate regulatory elements
36
gene expression
33
chromatin state
31
target gene predictions
18
differential activity
15
variant allelic effects
9
Fine-mapped variants
6
eQTL
4
accessible chromatin
4
binding sites
3
caQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
DNase-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
capillary endothelial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
Organ
8
epithelium
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
3
lung
2
brain
2
pancreas
1
bronchus
1
lymphatic vessel
1
vein
Life stage
1
newborn
Date released
3
April, 2020
1
May, 2020
Software used
macs
Lab
3
Xin Sun, UCSD
1
AMP-T2D consortium
Project
3
LungMap
1
AMP
RFA
3
LungMap2
1
AMP
software_used.software.name!
macs
Showing 4 of 4 results
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FileSet
DSR294KMW
released
Annotation file set
: ATAC-seq peaks in capillary 1 from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR864HPI
released
Annotation file set
: ATAC-seq peaks in capillary 2 from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR165PFW
released
Annotation file set
: ATAC-seq peaks in lymphatic endothelial cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR603NLX
released
Annotation file set
: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP