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Citing CMDGA
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Annotation type
26
gene expression
17
differential activity
12
accessible chromatin
6
binding sites
4
target gene predictions
2
variant allelic effects
1
chromatin state
Annotation Category
4
Target gene links
Annotation type Category
4
ATAC-seq
3
DNase-seq
3
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
coronary artery
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
smooth muscle cell of the coronary artery
Organ
72
epithelium
34
connective tissue
27
pancreas
14
brain
14
intestine
10
pituitary gland
10
skin of body
9
musculature of body
8
large intestine
7
heart
7
lung
6
adrenal gland
6
stomach
5
embryo
5
mammary gland
4
blood
4
bodily fluid
4
liver
4
vasculature
3
adipose tissue
3
blood vessel
3
extraembryonic component
3
limb
3
small intestine
3
uterus
2
artery
2
esophagus
2
gonad
2
ovary
2
prostate gland
2
thyroid gland
1
bone element
1
bone marrow
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
penis
1
placenta
1
spinal cord
1
spleen
1
thymus
1
vein
Date released
3
May, 2021
1
November, 2021
Software used
4
abc
Lab
AMP-T2D consortium
3
Jesse Engreitz, Stanford University
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
lab.title!
AMP-T2D consortium
Showing 4 of 4 results
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Download
FileSet
DSR451QZS
released
Annotation file set
: Target gene predictions of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP