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Schema
Citing CMDGA
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Annotation type
4
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
2
target gene predictions
1
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
1
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
5
endothelial cell of umbilical vein
4
aorta
3
ascending aorta
3
coronary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
1
brain microvascular endothelial cell
choroid plexus epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
Organ
3
blood vessel
3
vasculature
Life stage
3
adult
Date released
2
September, 2022
1
October, 2019
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
choroid plexus epithelial cell
Showing 3 of 3 results
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FileSet
DSR309BUW
released
Annotation file set
: Chromatin states for BSS00088 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR016LZI
released
Annotation file set
: Chromatin states for BSS00087 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220DMW
released
Annotation file set
: ChromHMM 16-state model for ascending aorta from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP