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Citing CMDGA
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Annotation type
1
target gene predictions
1
variant allelic effects
Annotation Category
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
12
coronary artery
10
tibial artery
8
ascending aorta
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
aorta
5
endothelial cell of umbilical vein
4
endothelial cell of hepatic sinusoid
4
pancreatic endothelial cell
4
smooth muscle cell of the coronary artery
4
vascular associated smooth muscle cell
3
thoracic aorta
2
cardiac fibroblast
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
fibroblast of the aortic adventitia
2
kidney capillary endothelial cell
2
smooth muscle cell of the brain vasculature
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
endothelial cell of lymphatic vessel
1
fibroblast of pulmonary artery
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
whole blood
Organ
2
brain
2
epithelium
2
vasculature
Life stage
1
unknown
Date released
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
cis-regulatory elements
Showing 2 of 2 results
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Download
FileSet
DSR805XSG
released
Annotation file set
: Target gene predictions for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492TXW
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain choroid plexus cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP