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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
4
aorta
3
choroid plexus epithelial cell
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
fibroblast of pulmonary artery
2
ascending aorta
2
dermis blood vessel endothelial cell
2
pulmonary artery endothelial cell
2
smooth muscle cell of the coronary artery
2
thoracic aorta
2
tibial artery
1
aortic endothelial cell
1
aortic smooth muscle cell
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
endothelial cell of lymphatic vessel
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
smooth muscle cell of the brain vasculature
1
vein endothelial cell
Organ
3
brain
3
epithelium
3
vasculature
Life stage
1
unknown
Date released
1
February, 2021
1
October, 2022
1
September, 2022
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR600YPJ
released
Annotation file set
: Binding sites annotation for choroid plexus epithelial cell (HCPEpiC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR805XSG
released
Annotation file set
: Target gene predictions for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LCX
released
Annotation file set
: Binding sites annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP