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Schema
Citing CMDGA
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Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
1
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
5
endothelial cell of umbilical vein
4
aorta
3
ascending aorta
3
coronary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
Organ
5
vasculature
3
blood vessel
2
epithelium
2
lymphatic vessel
2
skin of body
Life stage
3
adult
2
unknown
Date released
4
September, 2022
1
October, 2019
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR971IKF
released
Annotation file set
: Chromatin states for BSS01815 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118XVM
released
Annotation file set
: Chromatin states for BSS01814 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492AJM
released
Annotation file set
: Chromatin states for BSS00264 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019ZDM
released
Annotation file set
: Chromatin states for BSS00262 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP