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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
3
Fine-mapped variants
3
candidate regulatory elements
3
chromatin state
2
eQTL
2
target gene predictions
2
variant allelic effects
1
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
snATAC-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
6
endothelial cell of hepatic sinusoid
3
cardiac fibroblast
3
coronary artery
3
endothelial cell of lymphatic vessel
3
tibial artery
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
1
ascending aorta
1
brain microvascular endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
fibroblast of pulmonary artery
1
kidney capillary endothelial cell
1
placental villus capillary endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
thoracic aorta
Organ
4
blood vessel
4
vasculature
3
artery
3
limb
1
epithelium
1
extraembryonic component
1
placenta
Life stage
1
adult
Date released
1
January, 2020
1
June, 2020
1
November, 2019
1
November, 2021
Software used
4
macs
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR100TUS
released
Annotation file set
: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR784VZL
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular Tibial Arteries from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR890DLY
released
Annotation file set
: Accessible chromatin annotation of artery tibial from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267TMY
released
Annotation file set
: Accessible chromatin annotation of tibial artery
Lab:
AMP-T2D consortium
Project:
AMP