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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
chromatin state
3
target gene predictions
2
candidate regulatory elements
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
Target gene links
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ATAC-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
aorta
4
coronary artery
4
endothelial cell of umbilical vein
2
ascending aorta
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
fibroblast of the aortic adventitia
2
smooth muscle cell of the coronary artery
2
thoracic aorta
2
tibial artery
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of lymphatic vessel
1
fibroblast of pulmonary artery
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
Life stage
2
adult
Date released
2
September, 2022
1
February, 2023
1
May, 2021
Software used
2
r
1
abc
1
rasqual
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP