Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
2
ATAC-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
1
bigBed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
16
endothelial cell of hepatic sinusoid
15
coronary artery
14
endothelial cell of umbilical vein
13
tibial artery
10
ascending aorta
7
aorta
7
choroid plexus epithelial cell
7
smooth muscle cell of the coronary artery
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
fibroblast of pulmonary artery
5
thoracic aorta
4
dermis blood vessel endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
pulmonary artery endothelial cell
4
vascular associated smooth muscle cell
3
smooth muscle cell of the brain vasculature
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
fibroblast of the aortic adventitia
2
kidney capillary endothelial cell
2
lung microvascular endothelial cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic endothelial cell
1
aortic smooth muscle cell
1
cardiac fibroblast
1
circle of Willis
1
placental villus capillary endothelial cell
1
whole blood
Organ
5
blood vessel
5
vasculature
Life stage
3
adult
Date released
September, 2022
2
February, 2021
1
May, 2020
1
November, 2019
1
October, 2019
Software used
2
encode-ccres
1
chromhmm
1
deltasvm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR902SJX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846MBY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727LWQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in thoracic aorta ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR836QPQ
released
Annotation file set
: Accessible chromatin annotation of thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP