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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
accessible chromatin
1
chromatin state
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
1
bed bed9
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
12
coronary artery
12
endothelial cell of umbilical vein
10
endothelial cell of hepatic sinusoid
10
tibial artery
9
ascending aorta
7
aorta
6
smooth muscle cell of the coronary artery
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
fibroblast of pulmonary artery
4
pancreatic endothelial cell
4
thoracic aorta
4
vascular associated smooth muscle cell
3
dermis microvascular lymphatic vessel endothelial cell
3
pulmonary artery endothelial cell
2
cardiac fibroblast
2
dermis lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
fibroblast of the aortic adventitia
2
lung microvascular endothelial cell
2
smooth muscle cell of the brain vasculature
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic endothelial cell
1
aortic smooth muscle cell
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
circle of Willis
1
endothelial cell of lymphatic vessel
1
kidney capillary endothelial cell
1
whole blood
Organ
4
blood vessel
4
vasculature
Life stage
3
adult
Date released
September, 2022
2
February, 2021
1
May, 2020
1
October, 2019
Software used
2
encode-ccres
1
chromhmm
1
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
annotation_type!
accessible chromatin
Showing 4 of 4 results
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Download
FileSet
DSR902SJX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846MBY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727LWQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in thoracic aorta ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP