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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
7
endothelial cell of umbilical vein
6
dermis blood vessel endothelial cell
5
ascending aorta
5
coronary artery
5
thoracic aorta
5
tibial artery
4
aorta
3
choroid plexus epithelial cell
3
lung microvascular endothelial cell
3
smooth muscle cell of the brain vasculature
2
cardiac fibroblast
2
brain microvascular endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
pulmonary artery endothelial cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
Organ
3
brain
3
epithelium
3
vasculature
Life stage
2
unknown
Date released
1
February, 2021
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
kidney
Showing 3 of 3 results
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Download
FileSet
DSR064DCO
released
Annotation file set
: Candidate regulatory elements for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR982GZF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492TXW
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain choroid plexus cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP