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Schema
Citing CMDGA
Clear Filters
Annotation type
3
variant allelic effects
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
2
gene expression
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
cardiac fibroblast
2
coronary artery
2
tibial artery
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
ascending aorta
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
smooth muscle cell of the brain vasculature
1
thoracic aorta
Organ
3
vasculature
1
brain
1
epithelium
Date released
2
February, 2024
1
May, 2020
Software used
3
deltasvm
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
kidney
Showing 3 of 3 results
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Download
FileSet
DSR963XVP
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR265TNH
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR492TXW
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain choroid plexus cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP