Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
Biosample term
32
adipose tissue
32
fibroblast
27
adipocyte
22
pericyte cell
21
coronary artery
21
subcutaneous adipose tissue
20
endothelial cell of umbilical vein
19
foreskin fibroblast
19
mesenchymal stem cell
19
tibial artery
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
ascending aorta
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
13
aorta
12
fibroblast of dermis
12
skin fibroblast
11
hepatic stellate cell
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
10
pancreatic stellate cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
smooth muscle cell of the brain vasculature
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Mesangial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
HT1080
4
adult endothelial progenitor cell
4
aortic endothelial cell
4
bone tissue
4
brain pericyte
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
fibroblast of gingiva
4
pancreatic endothelial cell
4
preadipocyte
4
stromal cell of bone marrow
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
capillary endothelial cell
2
columnar chondrocyte
2
endothelial cell of coronary artery
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
abdominal aorta artery
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
aorta wall
1
aortic smooth muscle cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
circle of Willis
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
placental villus capillary endothelial cell
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
1
whole blood
Organ
4
epithelium
4
lymphatic vessel
4
skin of body
4
vasculature
0
connective tissue
Life stage
2
unknown
Date released
3
February, 2021
1
June, 2020
Software used
2
encode-ccres
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR307XVK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570CLQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR557WEE
released
Annotation file set
: Binding sites annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR841NUD
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP