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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
7
accessible chromatin
6
binding sites
5
target gene predictions
4
chromatin state
4
gene expression
Annotation Category
7
cis-regulatory elements
Annotation type Category
4
ATAC-seq
2
snATAC-seq
1
DNase-seq
Available data
7
bed bed3+
2
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Biosample term
6
endothelial cell of hepatic sinusoid
5
skeletal muscle fiber
5
skeletal muscle satellite cell
3
cardiac fibroblast
3
coronary artery
3
endothelial cell of lymphatic vessel
3
tibial artery
3
type I muscle cell
3
type II muscle cell
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
muscle of leg
1
hindlimb muscle
1
LHCN-M2
1
SJCRH30
1
ascending aorta
1
brain microvascular endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
esophagus muscularis mucosa
1
fibroblast of pulmonary artery
1
forelimb muscle
1
gastrocnemius medialis
1
kidney capillary endothelial cell
1
muscle of arm
1
placental villus capillary endothelial cell
1
psoas muscle
1
pulmonary artery endothelial cell
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
thoracic aorta
Organ
6
blood vessel
6
epithelium
6
liver
6
vasculature
1
limb
1
musculature of body
Life stage
4
adult
2
fetal
Date released
4
February, 2024
2
November, 2021
1
June, 2020
Software used
7
macs
Lab
4
Ines Cebola, Imperial College London
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
5
AMP
2
ENCODE
RFA
4
AMP2
2
ENCODE3
1
AMP
Showing 7 of 7 results
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Download
FileSet
DSR947VGN
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR698JKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR573JPW
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR467GJM
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR269PNK
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR195UVD
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR889VCH
released
Annotation file set
: Accessible chromatin annotation for Muscle Gastrocnemius medialis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP