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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
target gene predictions
3
binding sites
3
chromatin state
2
accessible chromatin
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
4
bed bed9
bigBed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
endothelial cell of umbilical vein
Organ
75
kidney
71
lung
71
musculature of body
66
brain
59
intestine
51
epithelium
46
connective tissue
46
limb
41
heart
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
25
vasculature
24
stomach
20
blood vessel
20
small intestine
16
liver
16
placenta
15
bone element
15
mammary gland
15
pancreas
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
penis
9
adipose tissue
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
artery
6
spleen
5
lymphoid tissue
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
nerve
3
skeleton
3
vein
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
2
newborn
Date released
2
September, 2022
1
August, 2017
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
files.file_type!
bigBed bed9
Showing 3 of 3 results
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FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP