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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
snATAC-seq
1
scRNA-seq
Available data
2
bed bed3+
2
bigWig
1
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
brain
4
heart
4
nephron progenitor
3
S-shaped body
3
kidney
3
kidney interstitial cell
2
endothelial cell of hepatic sinusoid
2
mesangial cell
2
renal vesicle
1
cardiac fibroblast
1
hindlimb muscle
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cerebellum
1
diencephalon
1
endothelial cell
1
epithelial cell of distal tubule
1
fetal heart
1
forelimb muscle
1
frontal cortex
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart left ventricle
1
heart right ventricle
1
hepatoblast
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
left cardiac atrium
1
left renal pelvis
1
leukocyte
1
liver
1
meso-epithelial cell
1
metanephros
1
muscle of arm
1
muscle of leg
1
occipital lobe
1
parietal lobe
1
pericardium fibroblast
1
proximal tubule
1
renal connecting tubule
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right renal pelvis
1
skeletal muscle tissue
1
temporal lobe
1
ureteric bud
Organ
3
epithelium
2
blood vessel
2
liver
2
vasculature
1
kidney
Life stage
14
adult
3
fetal
Date released
2
November, 2021
1
February, 2021
Software used
2
macs
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR947VGN
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR698JKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Endothelial 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR777KYP
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of ErPrT from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP