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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
ATAC-seq
Available data
4
bed bed3+
1
bed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
3
fibroblast of cardiac tissue
1
cardiac fibroblast
1
smooth muscle cell of the coronary artery
Organ
110
epithelium
67
connective tissue
42
vasculature
27
lung
24
skin of body
20
blood vessel
19
brain
19
kidney
18
lymph node
16
prostate gland
13
blood
13
bodily fluid
13
musculature of body
13
pancreas
12
artery
12
eye
11
bone element
11
extraembryonic component
8
bronchus
8
embryo
8
lymphatic vessel
8
mammary gland
6
liver
5
heart
4
bone marrow
4
esophagus
4
gonad
4
intestine
4
large intestine
4
mouth
4
placenta
4
spinal cord
4
testis
3
lymphoid tissue
1
adipose tissue
Life stage
98
embryonic
72
adult
11
child
8
fetal
5
unknown
3
young adult
Date released
3
September, 2022
2
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR102EHA
released
Annotation file set
: Candidate regulatory elements for BSS00166 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR215DPK
released
Annotation file set
: Target gene predictions for BSS00166 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125UTU
released
Annotation file set
: Chromatin states for BSS00166 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR442EVO
released
Annotation file set
: Accessible chromatin of smooth muscle cell of the coronary artery from GSE113348 ATAC-seq cell lines
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656QGJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP