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Citing CMDGA
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Annotation type
1
accessible chromatin
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
ChIP-seq
6
DNase-seq
1
RNA-seq
1
pCHi-C
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
1
bladder
1
bladder (urinary bladder)
1
urinary bladder
Organ
664
epithelium
328
kidney
235
connective tissue
199
pancreas
159
brain
130
vasculature
96
blood vessel
87
heart
79
embryo
75
liver
73
musculature of body
63
eye
60
uterus
50
limb
49
adipose tissue
48
bodily fluid
48
intestine
47
blood
40
artery
29
skin of body
26
lung
25
large intestine
20
bone element
20
stomach
17
adrenal gland
14
esophagus
13
extraembryonic component
13
gonad
13
mammary gland
12
nerve
12
pituitary gland
10
lymphatic vessel
10
prostate gland
9
lymph node
9
spinal cord
8
skeleton
8
small intestine
7
ovary
7
thyroid gland
7
ureter
6
placenta
6
spleen
6
vein
5
bronchus
5
testis
5
thymus
4
breast
4
lymphoid tissue
4
penis
3
bone marrow
3
mouth
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
1
trachea
Life stage
1
adult
Date released
1
June, 2020
1
March, 2020
1
March, 2024
Software used
1
macs
1
nospecificsoft_customcode
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
software_used.software.name!
cicero
annotation_type_category!
ChIP-seq
Showing 3 of 3 results
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Download
FileSet
DSR552KOA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Bladder.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PTG
released
Annotation file set
: Accessible chromatin annotation for Others Urinary Bladder from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR634RKB
released
Annotation file set
: A target gene prediction annotation in Human Bladder of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP