Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
3
Target gene links
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cell
1
cerebellum
1
cerebellum (Hemisphere)
1
conventional dendritic cell
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
left ventricle myocardium
1
macrophage
1
megakaryocyte
1
memory B cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
nucleus accumbens
1
omental fat pad
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
plasmacytoid dendritic cell
1
putamen
1
regulatory T cell
1
right atrium auricular region
1
right lobe of liver
1
stellate neuron
1
subcutaneous adipose tissue
1
substantia nigra
1
tibial artery
1
tibial nerve
Organ
3
epithelium
3
pancreas
Life stage
1
adult
Date released
2
January, 2021
1
February, 2021
Software used
7
macs
6
r
3
cicero
1
deltasvm
0
gtex_finemapping_eQTL:caviar
Lab
3
Kyle Gaulton, UCSD
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR746SVT
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGlow_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR998IGH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGhigh_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR014OEB
released
Annotation file set
: pancreatic alpha cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP