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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Biosample term
3
spinal cord
Organ
270
epithelium
130
connective tissue
98
brain
73
pancreas
67
eye
64
bodily fluid
62
blood
58
kidney
57
vasculature
49
liver
43
blood vessel
40
musculature of body
40
skin of body
37
heart
35
embryo
34
intestine
28
bone element
24
limb
22
lymph node
21
artery
21
lung
21
mammary gland
20
large intestine
20
prostate gland
16
extraembryonic component
13
penis
10
adipose tissue
9
placenta
9
stomach
8
gonad
8
skeleton
8
uterus
7
adrenal gland
6
bone marrow
6
lymphatic vessel
5
bronchus
5
testis
5
trachea
4
esophagus
4
thymus
4
ureter
4
vein
3
lymphoid tissue
3
nerve
3
small intestine
3
spinal cord
3
spleen
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Date released
2
June, 2020
1
February, 2021
Software used
17
r
9
chromhmm
8
encode-ccres
3
macs
1
abc
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
D341 Med cell
Showing 3 of 3 results
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Download
FileSet
DSR182OZJ
released
Annotation file set
: Binding sites annotation for Neural HA-sp from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625GRF
released
Annotation file set
: Accessible chromatin annotation for Neural HA-sp from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285UOW
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal Spinal Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP