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Embeddings type
1
Accessible chromatin
1
Gene expression
Embeddings Category
2
umap
Underlying Assay
1
10X scRNA-seq
1
sciATAC-seq
Available data
2
h5ad
1
mtx
1
rds
1
tsv
File set status
2
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
kidney
1
tissues
Tissue term
1
kidney
1
tissues
Organ
1
kidney
Life stage
1
adult
Date released
30
May, 2022
2
August, 2021
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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Showing 2 of 2 results
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FileSet
DSR772NPS
released
Embeddings file set
: This single-cell dataset is comprised of Healthy Reference: biopsy samples from the Human Cell Atlas participants, CKD: biopsy samples from the KPMP Main Study protocol participants, and AKI: biopsy samples from the KPMP Main Study protocol participants.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE