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Citing CMDGA
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Embeddings type
6
Gene expression
3
Accessible chromatin
Embeddings Category
6
umap
Underlying Assay
4
10X scRNA-seq
2
10X snRNA-seq
2
Smart-seq
Available data
6
h5ad
1
mtx
1
rds
1
tsv
File set status
6
released
Organism
5
Homo sapiens
Biosample type
6
tissue
1
primary cell
Biosample term
3
heart
3
pancreas
2
kidney
2
lung
1
bladder organ
1
blood
1
bone marrow
1
cell
endothelial cell
1
epithelial cell
1
eye
1
fat pad
1
immune system
1
islet of Langerhans
1
large intestine
1
liver
1
lymph node
1
major salivary gland
1
mammary gland
1
muscle organ
1
peripheral blood mononuclear cell
1
prostate gland
1
skeletal muscle tissue
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
Tissue term
3
heart
2
kidney
1
blood
1
pancreas
Organ
2
heart
2
kidney
1
blood
1
bodily fluid
1
pancreas
Life stage
4
adult
Date released
2
May, 2022
1
August, 2021
1
February, 2023
1
September, 2020
1
September, 2023
Lab
5
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
1
T1D
RFA
5
AMP
1
T1D
biosample_term_name!
endothelial cell
Showing 6 of 6 results
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FileSet
DSR772NPS
released
Embeddings file set
: This single-cell dataset is comprised of Healthy Reference: biopsy samples from the Human Cell Atlas participants, CKD: biopsy samples from the KPMP Main Study protocol participants, and AKI: biopsy samples from the KPMP Main Study protocol participants.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR957UZP
released
Embeddings file set
: The human cell atlas of Kidney from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271MPP
released
Embeddings file set
: The human cell atlas of Heart from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D