Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Embeddings type
2
Accessible chromatin
1
Gene expression
Embeddings Category
3
umap
Underlying Assay
2
10X scRNA-seq
2
10X snATAC-seq
10X snRNA-seq
Smart-seq
Available data
3
h5ad
File set status
3
released
Organism
2
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
4
islet of Langerhans
3
pancreas
2
peripheral blood mononuclear cell
1
carotid canal
1
immune system
1
kidney
1
lung
1
skeletal muscle tissue
1
tissues
Tissue term
2
blood
2
pancreas
1
lung
Organ
2
blood
2
bodily fluid
2
pancreas
1
lung
Date released
2
August, 2021
1
September, 2021
Lab
2
Kyle Gaulton, UCSD
1
Xin Sun, UCSD
Project
2
T1D
1
LungMap
RFA
2
T1D
1
LungMap2
embeddings_underlying_assay!
10X snRNA-seq
Smart-seq
Showing 3 of 3 results
table-tab-icon
matrix-icon
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D