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Schema
Citing CMDGA
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Embeddings type
2
Accessible chromatin
Cohort
1
HPAP
Embeddings Category
2
umap
Underlying Assay
1
10X scATAC-seq
1
sciATAC-seq
Available data
1
h5ad
1
rds
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
3
heart
3
lung
2
islet of Langerhans
2
kidney
2
pancreas
2
skeletal muscle tissue
1
bladder organ
1
blood
1
bone marrow
1
carotid canal
1
cell
1
endothelial cell
1
epithelial cell
1
eye
1
fat pad
1
immune system
1
large intestine
1
liver
1
lymph node
1
major salivary gland
1
mammary gland
1
muscle organ
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tissues
1
tongue
1
trachea
1
uterus
1
vasculature
Tissue term
2
pancreas
Organ
2
pancreas
Date released
August, 2021
1
February, 2021
1
March, 2024
Lab
2
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
month_released!
August, 2021
Showing 2 of 2 results
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FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR322WJB
released
Embeddings file set
: Islet snATAC-seq from control samples
Lab:
Kyle Gaulton, UCSD
Project:
AMP