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Citing CMDGA
Clear Filters
Embeddings type
3
Gene expression
2
Accessible chromatin
Embeddings Category
5
umap
Underlying Assay
10X scRNA-seq
28
Smart-seq
3
10X snRNA-seq
1
10X snATAC-seq
1
sciATAC-seq
Available data
5
h5ad
4
mtx
4
tsv
1
bed bed3
1
cloupe
1
rds
1
tbi
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
2
heart
2
skeletal muscle tissue
1
islet of Langerhans
Tissue term
2
heart
2
skeletal muscle tissue
1
pancreas
Organ
2
musculature of body
1
heart
1
pancreas
Life stage
1
adult
Date released
2
May, 2022
1
February, 2021
1
February, 2023
1
September, 2020
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
2
LungMap2
1
ENCODE3
1
T1D
embeddings_underlying_assay!
10X scRNA-seq
Showing 5 of 5 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384UWH
released
Embeddings file set
: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR322WJB
released
Embeddings file set
: Islet snATAC-seq from control samples
Lab:
Kyle Gaulton, UCSD
Project:
AMP