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Citing CMDGA
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Embeddings type
2
Accessible chromatin
Embeddings Category
2
umap
Underlying Assay
3
10X snATAC-seq
3
10X snRNA-seq
2
sciATAC-seq
1
10X scATAC-seq
1
10X scRNA-seq
Available data
2
h5ad
1
mtx
1
tsv
File set status
2
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
islet of Langerhans
1
tissues
Tissue term
1
pancreas
1
tissues
Organ
1
pancreas
Date released
1
February, 2021
1
November, 2021
Lab
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
files.file_type!
cloupe
relevant_life_stage!
adult
software_used.software.name!
r
Showing 2 of 2 results
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FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR322WJB
released
Embeddings file set
: Islet snATAC-seq from control samples
Lab:
Kyle Gaulton, UCSD
Project:
AMP