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Schema
Citing CMDGA
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Embeddings type
3
Gene expression
1
Accessible chromatin
Embeddings Category
4
umap
Underlying Assay
10X scRNA-seq
28
Smart-seq
3
10X snRNA-seq
1
10X snATAC-seq
Available data
4
h5ad
4
mtx
4
tsv
1
bed bed3
1
cloupe
1
tbi
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
heart
2
skeletal muscle tissue
Tissue term
2
heart
2
skeletal muscle tissue
Organ
2
musculature of body
1
heart
Life stage
1
adult
Date released
2
May, 2022
1
February, 2023
1
September, 2020
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
2
Xin Sun, UCSD
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
embeddings_underlying_assay!
10X scRNA-seq
Showing 4 of 4 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384UWH
released
Embeddings file set
: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP