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Citing CMDGA
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Embeddings type
3
Gene expression
1
Accessible chromatin
Embeddings Category
4
umap
Underlying Assay
2
10X snRNA-seq
1
10X scRNA-seq
1
10X snATAC-seq
Available data
4
h5ad
1
mtx
1
tsv
File set status
4
released
Organism
3
Homo sapiens
Biosample type
4
tissue
2
primary cell
Biosample term
4
islet of Langerhans
3
pancreas
2
heart
2
lung
2
peripheral blood mononuclear cell
1
kidney
1
tissues
Tissue term
2
blood
2
heart
2
pancreas
Organ
2
blood
2
bodily fluid
2
pancreas
1
heart
Life stage
1
adult
Date released
2
August, 2021
1
February, 2023
May, 2022
1
September, 2020
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
2
AMP
2
T1D
RFA
2
AMP
2
T1D
month_released!
May, 2022
Showing 4 of 4 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D