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Citing CMDGA
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Embeddings type
3
Gene expression
1
Accessible chromatin
Embeddings Category
4
umap
Underlying Assay
3
10X scRNA-seq
2
Smart-seq
1
sciATAC-seq
Available data
4
h5ad
1
mtx
1
tsv
File set status
4
released
Organism
3
Homo sapiens
Biosample type
tissue
5
primary cell
Biosample term
1
cell
endothelial cell
1
epithelial cell
1
immune system
1
tissues
Tissue term
1
cell
1
epithelial cell
1
leukocyte
1
tissues
Organ
connective tissue
1
epithelium
Life stage
3
adult
Date released
3
May, 2022
1
November, 2021
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
organ_slims!
lymph node
connective tissue
biosample_type!
tissue
biosample_term_name!
endothelial cell
Showing 4 of 4 results
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FileSet
DSR996NUW
released
Embeddings file set
: The human cell atlas of all immune cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988JIN
released
Embeddings file set
: The human cell atlas of epithelial cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR622GML
released
Embeddings file set
: The human cell atlas of all cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE