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Schema
Citing CMDGA
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Embeddings type
4
Gene expression
1
Accessible chromatin
Embeddings Category
5
umap
Underlying Assay
3
10X scRNA-seq
2
Smart-seq
1
10X snATAC-seq
1
10X snRNA-seq
Available data
5
h5ad
1
mtx
1
tsv
File set status
5
released
Organism
4
Homo sapiens
Biosample type
5
tissue
2
primary cell
Biosample term
2
heart
2
islet of Langerhans
2
pancreas
2
peripheral blood mononuclear cell
1
blood
Tissue term
3
blood
2
heart
2
pancreas
Organ
6
pancreas
3
blood
3
bodily fluid
3
lung
3
musculature of body
2
bone element
2
connective tissue
2
epithelium
2
heart
2
intestine
2
kidney
2
mouth
1
adipose tissue
1
bone marrow
1
eye
large intestine
1
liver
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
Life stage
3
adult
Date released
2
August, 2021
2
May, 2022
1
February, 2023
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
3
AMP
2
T1D
RFA
3
AMP
2
T1D
organ_slims!
large intestine
Showing 5 of 5 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271MPP
released
Embeddings file set
: The human cell atlas of Heart from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284DTT
released
Embeddings file set
: The human cell atlas of Blood from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D