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Embeddings type
1
Accessible chromatin
1
Gene expression
Embeddings Category
2
umap
Underlying Assay
10X scRNA-seq
2
Smart-seq
1
10X snATAC-seq
1
10X snRNA-seq
Available data
2
h5ad
1
mtx
1
tsv
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
heart
1
islet of Langerhans
1
pancreas
1
peripheral blood mononuclear cell
Tissue term
1
blood
1
heart
1
pancreas
Organ
3
pancreas
2
lung
2
musculature of body
1
blood
1
bodily fluid
1
bone element
1
heart
Life stage
1
adult
Date released
1
August, 2021
1
February, 2023
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
1
AMP
1
T1D
RFA
1
AMP
1
T1D
embeddings_underlying_assay!
10X scRNA-seq
Showing 2 of 2 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D