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Schema
Citing CMDGA
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Embeddings type
1
Accessible chromatin
1
Gene expression
Cohort
1
HPAP
Embeddings Category
2
umap
Underlying Assay
1
10X scATAC-seq
1
10X scRNA-seq
Available data
39
h5ad
5
mtx
5
tsv
2
rds
1
bed bed3
1
cloupe
1
tbi
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
islet of Langerhans
1
kidney
Tissue term
1
kidney
1
pancreas
Organ
1
kidney
1
pancreas
Life stage
1
adult
Date released
1
March, 2024
1
September, 2023
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
tissue_term_name!
uterus
spleen
Showing 2 of 2 results
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FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR772NPS
released
Embeddings file set
: This single-cell dataset is comprised of Healthy Reference: biopsy samples from the Human Cell Atlas participants, CKD: biopsy samples from the KPMP Main Study protocol participants, and AKI: biopsy samples from the KPMP Main Study protocol participants.
Lab:
AMP-T2D consortium
Project:
AMP