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Citing CMDGA
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Embeddings type
3
Gene expression
1
Accessible chromatin
Embeddings Category
4
umap
Underlying Assay
3
10X scRNA-seq
2
Smart-seq
1
10X snATAC-seq
Available data
4
h5ad
File set status
4
released
Organism
3
Homo sapiens
Biosample type
4
tissue
2
primary cell
Biosample term
2
islet of Langerhans
2
pancreas
2
peripheral blood mononuclear cell
1
blood
1
fat pad
Tissue term
6
pancreas
3
blood
3
heart
3
lung
2
kidney
2
skeletal muscle tissue
1
bladder organ
1
bone marrow
1
carotid canal
1
cell
1
endothelial cell
1
epithelial cell
1
eye
1
fat pad
1
large intestine
1
leukocyte
1
liver
1
lymph node
1
major salivary gland
mammary gland
1
muscle organ
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tissues
1
tongue
1
trachea
1
uterus
1
vasculature
Organ
3
blood
3
bodily fluid
2
pancreas
1
adipose tissue
1
connective tissue
Life stage
2
adult
Date released
2
August, 2021
2
May, 2022
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
2
AMP
2
T1D
RFA
2
AMP
2
T1D
tissue_term_name!
mammary gland
Showing 4 of 4 results
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FileSet
DSR461STO
released
Embeddings file set
: The human cell atlas of Fat from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284DTT
released
Embeddings file set
: The human cell atlas of Blood from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D