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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
1130
total RNA-seq
909
ChIP-seq
370
ATAC-seq
215
single cell RNA-seq
84
RNA microarray
63
snATAC-seq
62
WGBS
45
DNase-seq
10
RRBS
8
pCHi-C
8
small RNA-seq
4
MeRIP-seq
3
FAIRE-seq
3
snDrop-seq
1
DNAme array
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
1
brain
1
kidney
1
pancreas
Life stage
3
adult
1
newborn
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
1
fastq
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
50
Library made from
3
DNA
Date released
2
July, 2019
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
3
anisogenic
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3D chromatin structure
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Experiment
DSR821PLA
released
FAIRE-seq
of kidney
Homo sapiens
kidney female adult (30 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR405QWU
released
FAIRE-seq
of frontal cortex
Homo sapiens
frontal cortex female adult (67 years) and female adult (80 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP