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Schema
Citing CMDGA
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Assay category
3D chromatin structure
1
DNA binding
Assay
2
pCHi-C
1
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Target of assay
1
transcription factor
Biosample type
3
cell line
Organ
3
liver
Life stage
1
adult
1
child
1
unknown
Available data
bam
366
fastq
318
bigWig
294
bed narrowPeak
293
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
6
tsv
3
tar
1
bed bed3
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Platform
1
Illumina Genome Analyzer IIx
Run type
1
single-ended
Read length (nt)
1
36
Library made from
3
DNA
Date released
August, 2021
1
February, 2021
1
May, 2020
1
November, 2017
Lab
3
AMP-T2D consortium
Replication type
3
isogenic
assay_slims!
3D chromatin structure
files.file_type!
bam
month_released!
August, 2021
Showing 3 of 3 results
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Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR452PKJ
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641802
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
TBL1XR1
Lab:
AMP-T2D consortium
Project:
AMP