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Assay category
DNA binding
6
DNA accessibility
Assay
6
ATAC-seq
Project
6
AMP
RFA
1665
AMP
98
T1D
10
HPAP
6
AMP2
Experiment status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
tissue
Organ
2
connective tissue
1
pancreas
Life stage
5
unknown
1
adult
Available data
68
bed narrowPeak
64
xls
60
txt
10
tsv
6
bigWig
3
bed bedgraph
3
hic
2
bed bed3+
2
bedpe bed3+
1
bed broadPeak
1
bedpe
1
fastq
1
vcf
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
125
Library made from
6
DNA
Date released
3
February, 2023
2
August, 2021
1
October, 2017
Lab
5
Struan F.A. Grant, CHOP
1
Stephen Parker, UMich
Replication type
3
anisogenic
3
isogenic
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
Showing 6 of 6 results
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Experiment
DSR820FCL
released
Audit error
1
ATAC-seq
of neuron cell of Hypothalamus (neuron)
Homo sapiens
neuron cell of Hypothalamus (neuron)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR166IXM
released
ATAC-seq
of Progenitor cell of Hypothalamus (neural progenitor cell)
Homo sapiens
Progenitor cell of Hypothalamus (neural progenitor cell)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR470JFP
released
ATAC-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR744YQW
released
ATAC-seq
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR783SBB
released
ATAC-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP