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Assay category
DNA binding
3
DNA accessibility
3
Transcription
Assay
2
DNase-seq
2
total RNA-seq
1
ATAC-seq
1
small RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Organ
120
heart
78
kidney
39
limb
35
musculature of body
24
brain
18
ureter
16
bone element
16
skeleton
9
epithelium
7
blood vessel
7
vasculature
6
embryo
6
liver
5
lung
4
connective tissue
4
pancreas
3
eye
2
artery
1
pericardium
Life stage
166
unknown
45
adult
23
child
6
embryonic
Available data
6
bam
5
bigWig
3
bed narrowPeak
3
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
fastq
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
36
Library made from
3
DNA
3
RNA
Date released
2
July, 2019
2
November, 2018
2
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
1
isogenic
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
Showing 6 of 6 results
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Experiment
DSR931DRP
released
total RNA-seq
of liver
Homo sapiens
liver embryo (12 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR093FMP
released
Audit error
1
ATAC-seq
of Liver fetal (hepatocyte)
Homo sapiens
Liver fetal (hepatocyte) female embryo (76 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR525YKK
released
total RNA-seq
of liver
Homo sapiens
liver female embryo (20 weeks) and male embryo (22 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR494RGE
released
small RNA-seq
of liver
Homo sapiens
liver female embryo (20 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP